Varian Cary 5000 User Manual

Manual is about: absorption spectrometer with external DRA 1800 attachment

Summary of Cary 5000

  • Page 1

    1 userguideforcary5000absorptionspectrometer withexternaldra1800attachment. (lastupdated03/17/2016) thisguideisforuseofthecary5000withthedraonly.Forusewithoutthedraasa standardtransmissionspectrometerseetheuserguideforcary5000inabsorption mode. Importantwarnings! • donotunplugorplugintheexternaldraa...

  • Page 2: Introductionandhelp

    2 13. Shutdowncomputer. Introductionandhelp foracompleteguidetothecaryhardwareand openthecary“scan”programandclickonthe help tab. Forthebasictheoryofdiffusereflectance measurements,usefuldiagramsofthediffuse reflectanceadaptor(dra),alignmenttipsand procedures,anddescriptionsofallthedra accessories(v...

  • Page 3

    3 thevathaccessory,pleasetalktooneoftheglasfortheinstrumentfirst. Forthenormalorlargesamplesetuptherearethreepositionsforthelargestandard m3mirror(seefigure3andfigure4)thatcorrespondtothethreesamplepositions (transmission,center,andreflection).Eachofthemirrorpositionswillfocusthelight ontothepositio...

  • Page 4: Smallsamples

    4 beamhitsthecenterofmirrorm3thenusem3sothebeamhitsthecenterofthe sample.Someofthemirrorsaremorecomplicatedtoadjust(althoughthesecan oftenbeleftalone).Forhelpwithalignment,talktooneoftheglasandread thealignmentinstructions,whichcanbefoundunderhelp. Smallsamples mosttypicallabsamplesaresmallerinsizet...

  • Page 5

    5 electronicnoise.Inthiscase,donotblockthebeamsothatthe0%tbaseline accountsforthelightreflectingontheedgesoftheaperture. Performingazero/baselinecorrection:selectthisoptiontoapplya100%t baselinecorrection(100%tbaseline)andazero-linecorrection(0%tbaseline)to thesamplescan(s).Thiscorrectionisperformed...

  • Page 6

    6 someofthevarianaccessories.Youcancollectabaselineimmediatelybefore scanningasampleoruseastoredbaseline. Theaccuracyofyourbaselinedeterminestheaccuracyofyourmeasurement. Youshouldperformazero/baselinecorrectionbeforerunningyoursamples aftertheinstrumenthaswarmedupfor~20minutesusingthesamescan param...

  • Page 7: Commandsmenu

    7 instrument'szerolinewillaffectyourmeasurementsiftheyyoudonotcorrect forthese.Youshouldrefertoastmmethode903forfurtherdetails. Seeappendixbformoreinfoontheacquisition,storing,andretrievalofbaseline files storagetabundersetup theautostoretaballowsyoutospecifyifyouwanttobepromptedtostorethe collected...

  • Page 8: Graphmenu

    8 application(andstillkeepotherapplicationsrunning)youwillneedtoselect connectintheapplicationyouwishtoconnecttothecary. Zero:selectthistozerothecurrentordinatevalueusingthestartwavelength (orequivalent)valuesetinthecarytabofthesetupdialogbox.Thecarywill changetothiswavelengthifcurrentlyidlingatadif...

  • Page 9

    9 selectthisoptiontodisplaythe saveas dialogboxandstorethecurrent method.Youcanusethesaveasdialogboxtostorethemethod,data,report,or graphicstemplateseparatelyortogetherasabatchfile.Thedatacanalsobe savedasacarygramsfile,acommadelimitedasciispreadsheetfileorin formatssuitableforothercarysoftwaresyste...

  • Page 10

    10 7. Makesurethatthesaveonlyfocusedtracecheckboxisnotchecked. 8. Inthefilenamefield,typeinthefilenameforyournewbatchfile. 9. Click save tocreatethenewbatchfile.Thecurrentmethodwillbestored withthebatchfiles.Allthedatafilesarenowcombinedintotheonebatch file..

  • Page 11: Appendixa

    11 appendixa howthecary5000/6000icontrolssbwandenergy indoubleordoublereversebeammodeintheuv/visregion,(pmtdetector),theslit width(sbw)isusedtocontroltheenergylevel.Inthenirregion(ingaasdetector)the reverseisnormallytrue—theenergylevelcontrolsthesbw.Duetotheinherent differencesbetweenthetwotypesofde...

  • Page 12

    12 abaselinecannotbeappliedtoasamplewheretheabscissarangeofthesample exceedsthatofthebaseline.Ifyouchangeyourabscissarangetooneoutsidethatofthe baseline,thecarywilldisplayanerrormessage.Alsotheredtextintheordinate displaywhichindicatesthatbaselinecorrectionmodeisactivatedwilldisappear. Notthatallval...

  • Page 13

    13 selectthisoptiontoapplya100%tbaselinecorrection(100%tbaseline)andazero- linecorrection(0%tbaseline)tothesamplescan(s).Thiscorrectionisperformedwith therawtransmissiondataandisthus: s − 0%tbaseline 100%tbaseline − 0%tbaseline withthisoption,thecarywillpromptyoutoperforma100%tbaselinefirst,followed...

  • Page 14

    14 withthisoption,thecarywillpromptyoutoperforma100%tbaselinefirst,followed bya0%tbaselinewhenyouperformabaselinecollection. Note ifyouselectthisoptionthebaselinebuttoninthemainwindowwillnotbeenabled untilyouhaveretrievedastdreffile.Clickthisbuttontobrowseforandselecta stdreffile.Thisfilemustbeinthe...

  • Page 15: Appendixc

    15 retrievestdreffile thisbuttondisplaysthewindowsopendialogboxwhereyoucanselectastored referencefile.Thetraceinthisfilewillbeusedinthezeroxstdrefcorrection.The nameoftheselectedfileappearsnexttothestdrefbutton. Tip thestdreffilemustbeintheerror!Hyperlinkreferencenotvalid.Format.You canobtainthesefi...

  • Page 16

    16 autoscale[x]:select autoscale[x] toautomaticallyscalecollecteddatabyscalingthe abscissa(x)widthtofullscreen. Autoscale[y]:select autoscale[y] toautomaticallyscalecollecteddatabyscalingthe ordinate(y)heighttofullscreen. Zoomout:select zoomout tozoombacktotheoriginalxandyaxisscalingsetinthe caryset...

  • Page 17

    17 visible:thisfieldallowsyoutodeterminewhichtraceswillappearontheselected graph.Clickinthiscolumntoplaceaticknexttothetraceyouwanttoappearonthe graph.Clickagaintoremovetheticknexttothetrace. Ifyouareinsinglegraphview,allselectedtraceswillappearontheonegraph.Ifyou areinmultigraphview,thetraceswillap...

  • Page 18

    18 previewbox:apreviewofeachoftheaxesvariablesisshowntotherightofthisdialog box.Tochangetheview,alterthesettingsinthevariablesontheleft. Axescolor:fromthedrop-downlist,selectthecolorthatyouwanttoassigntothe axesofthegraph(s). Axeswidth:fromthedrop-downlist,selectthewidthoftheaxes.Thewidthisgivenin p...

  • Page 19

    19 decimals:selectthistodeterminehowmanydecimalplacesyouwanttoassigntoeach tickmark(graduation)onyourgraph. Showlegend:selectthistodisplayalegendontherightsideofeachgraphbox. Asingleclickonasamplenameorexamplelinewithinthelegendwillmakeitthe focusedorredscan.Informationaboutthetracewillbedisplayedbe...